
CLC number:
On-line Access: 2026-03-25
Received: 2025-07-29
Revision Accepted: 2025-11-01
Crosschecked: 2026-03-25
Cited: 0
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Citations: Bibtex RefMan EndNote GB/T7714
https://orcid.org/0000-0002-8430-1980
Lemin SHI, Yuqiang ZHANG, Haoyu QI, Chengyue LU, Menglei HU, Mingye LI, Dianxin SONG, Hao ZHANG, Xin FENG, Ping GONG, Shan JIANG. Deep-learning-enabled automatic gene abnormality detection via fluorescence in situ hybridization[J]. Journal of Zhejiang University Science A,in press.Frontiers of Information Technology & Electronic Engineering,in press.https://doi.org/10.1631/jzus.A2500360 @article{title="Deep-learning-enabled automatic gene abnormality detection via fluorescence in situ hybridization", %0 Journal Article TY - JOUR
基于深度学习的荧光原位杂交自动基因异常检测机构:1长春理工大学,计算机科学与技术学院,生命科学与技术学院,中国长春,130022;2吉林建筑大学,现代工业学院,中国长春,130119;3西安电子科技大学,杭州研究院,中国杭州,311231;4澳门大学,机电工程系,人工智能与机器人研究中心,中国澳门,999078;5不列颠哥伦比亚大学,电气与计算机工程系,加拿大温哥华,V6T 1Z4;6墨尔本大学,计算机与信息系统学院,澳大利亚帕克维尔,3010 目的:开发一种基于深度学习的基因异常检测自动化系统(FAST),以突破传统荧光原位杂交(FISH)技术在癌症和遗传疾病诊断中的局限性。 创新点:1.多层焦平面成像策略:增强不同焦深的成像,实现精确的细胞分析;2.图像增强与融合:结合多尺度滤波技术,提升信号清晰度;3.深度学习集成:优化ResNet152深度学习框架以进行高效的基因异常分类,细胞分割准确率为98.28%,基因异常检测准确率为97.86%。 方法:1.FISH成像:利用三色FISH探针和电动荧光显微镜进行多层成像;2.图像处理:基于多层荧光信号融合、图像增强以及细胞核和荧光信号的自动分割;3.AI模型:基于ResNet152的卷积神经网络(CNN)型,经过训练用于检测染色体异常(例如慢性淋巴细胞白血病中的13q14缺失)。 结论:1.FAST系统在细胞核分割和基因异常检测方面均取得高精度结果,细胞分割准确率达98.28%,以及基因异常检测准确率达97.86%。2.系统实现了从成像到报告生成的全流程自动化,且可在45分钟内完成检测,提升了诊断效率并降低了对人工经验的依赖,因此具有良好的临床应用潜力。 关键词组: Darkslateblue:Affiliate; Royal Blue:Author; Turquoise:Article
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